Lucid Genomics Announces Compatibility Partnership with Oxford Nanopore Technologies

Lucid Genomics’ tertiary pipeline is validated for the interpretation of data generated using Oxford Nanopore sequencing. 

BERLIN, Germany, May 19th, 2026Lucid Genomics GmbH, a bioinformatics company purpose-built for long-read sequencing, today announced a compatibility partnership with Oxford Nanopore Technologies plc. Under the partnership, Lucid Genomics’ tertiary analysis pipeline is validated for use with long and ultra-long readsdata generated on Oxford Nanopore sequencing platform. 

Lucid’s tertiary engine processes basecalled, aligned, and variant-called nanopore sequencing data through annotation, variant classification, phenotype-driven case ranking, integrated handling of structural variants and methylation - all tuned for long Oxford Nanopore reads. 

“This partnership highlights the importance of a strong, interoperable ecosystem to support Oxford Nanopore sequencing” said Dr. Thomas Bray, VP Corporate Business Development at Oxford Nanopore Technologies. “ Solutions such as Lucid’s pipeline help laboratories extract value from complex genomic data and integrate these workflows into existing research environments.”

A tertiary pipeline built for Nanopore data

Oxford Nanopore sequencing enables the analysis of native DNA and RNA in real time, supporting long and ultra-long reads (up to 4 Mb) and direct detection of base modifications such as 5mC and 6mA from the signal. Lucid’s tertiary pipeline carries this information end-to-end: structural variants resolved by long reads are annotated against curated disease, gene, and population datasets; methylation calls are integrated alongside sequence variants in case review; and ultra-long-range context is preserved through to the final report rather than collapsed to short-read equivalents.

What this means for Oxford Nanopore Users

For laboratories running the Oxford Nanopore sequencing platform, the partnership offers a validated route into tertiary interpretation. Customers can deploy Lucid’s cloud-native pipeline with confidence it has been tested against Oxford Nanopore data, reducing integration risk across applications spanning rare disease, hereditary cancer, and pharmacogenomics.



About Lucid Genomics

Lucid Genomics is a cloud-native secondary and tertiary analysis platform built from the ground up for long-read sequencing. Lucid Genomics develops dedicated products for rare disease diagnostics, hereditary cancer, and pharmacogenomics. As Nanopore sequencing scales, the real opportunity lies in uncovering what was previously invisible: structural variants, methylation patterns, repeat expansions, and non-coding genome regions. Lucid is a pioneer in long-read interpretation, combining proprietary prioritisation algorithms with cutting-edge visualisations purpose-built for long-read data. Together with native variant calling, advanced phasing, and annotation, this delivers a validated path from sequencer to actionable insights. As a trusted Oxford Nanopore and PacBio Compatibility partner, Lucid helps clinical labs, researchers, and pharma innovators realise the full promise of long-read genomics.


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